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Table 1 The list of ADNP variants identified in the reported individuals

From: Clinical impact and in vitro characterization of ADNP variants in pediatric patients

ID

Age/months

Gender

Variant in cDNA

(NM_015339.5)

Protein change

(Q9H2P0)

Variant type

Inheritance

ACMG

Clinvar

HGMD

SIFT

Polyphen2

Mutationtaster

REVEL

CADD

gnomAD

(AC|Hom)

hmut1

42

Male

c.64dupA

p.I22Nfs*3

Frameshift

De novo

Pathogenic

(PVS1 + PS2 + PM2 + PP5)

Pathogenic

DM?

     

0|0

hmut2

38

Female

c.498_499del

p.Y166*

Deletion

De novo

Pathogenic

(PVS1 + PS2 + PM2)

       

0|0

hmut3

86

Male

c.673C > T

p.R225*

Nonsense

De novo

Pathogenic

(PVS1 + PM2 + PM6)

Pathogenic

DM

  

D

 

35

0|0

hmut5

74

Male

c.2157C > A

p.Y719*

Nonsense

De novo

Pathogenic

(PVS1 + PM2 + PM6)

Pathogenic

DM

  

D

 

22.9

0|0

hmut6

24

Female

c.2157C > A

p.Y719*

Nonsense

Not available

Pathogenic

(PVS1 + PM2 + PM6)

Pathogenic

DM

  

D

 

22.9

0|0

hmut7

44

Male

c.2157C > G

p.Y719*

Nonsense

De novo

Pathogenic

(PVS1 + PS2 + PM2)

Pathogenic

DM

  

D

 

22.9

0|0

hmut8

36

Male

c.2157C > G

p.Y719*

Nonsense

De novo

Pathogenic

(PVS1 + PS2 + PM2)

Pathogenic

DM

  

D

 

22.9

0|0

hmut10

33

Female

c.2188C > T

p.R730*

Nonsense

De novo

Pathogenic

(PVS1 + PS2 + PM2 + PP5)

Pathogenic

DM

  

D

 

36

0|0

hmut11

13

Male

c.2188C > T

p.R730*

Nonsense

De novo

Pathogenic

(PVS1 + PS2 + PM2 + PP5)

Pathogenic

DM

  

D

 

36

0|0

hmut12

16

Male

c.2188C > T

p.R730*

Nonsense

De novo

Pathogenic

(PVS1 + PS2 + PM2)

Pathogenic

DM

  

D

 

36

0|0

hmut13

42

Male

c.2289delC

p.Y764Mfs*8

Frameshift

Not available

Pathogenic

(PVS1 + PS2 + PM2)

       

0|0

hmut14

25

Male

c.2355_2356 del AA

p.E785Dfs*2

Frameshift

De novo

Likely Pathogenic

(PVS1 + PM2)

       

0|0

hmut15

56

Female

c.2491_2494 del TTAA

p.L831I fs*82

Frameshift

De novo

Pathogenic

(PVS1 + PS2 + PM2)

Pathogenic

DM

     

1|0