From: Clinical impact and in vitro characterization of ADNP variants in pediatric patients
ID | Age/months | Gender | Variant in cDNA (NM_015339.5) | Protein change (Q9H2P0) | Variant type | Inheritance | ACMG | Clinvar | HGMD | SIFT | Polyphen2 | Mutationtaster | REVEL | CADD | gnomAD (AC|Hom) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
hmut1 | 42 | Male | c.64dupA | p.I22Nfs*3 | Frameshift | De novo | Pathogenic (PVS1 + PS2 + PM2 + PP5) | Pathogenic | DM? |  |  |  |  |  | 0|0 |
hmut2 | 38 | Female | c.498_499del | p.Y166* | Deletion | De novo | Pathogenic (PVS1 + PS2 + PM2) |  |  |  |  |  |  |  | 0|0 |
hmut3 | 86 | Male | c.673C > T | p.R225* | Nonsense | De novo | Pathogenic (PVS1 + PM2 + PM6) | Pathogenic | DM |  |  | D |  | 35 | 0|0 |
hmut5 | 74 | Male | c.2157C > A | p.Y719* | Nonsense | De novo | Pathogenic (PVS1 + PM2 + PM6) | Pathogenic | DM |  |  | D |  | 22.9 | 0|0 |
hmut6 | 24 | Female | c.2157C > A | p.Y719* | Nonsense | Not available | Pathogenic (PVS1 + PM2 + PM6) | Pathogenic | DM |  |  | D |  | 22.9 | 0|0 |
hmut7 | 44 | Male | c.2157C > G | p.Y719* | Nonsense | De novo | Pathogenic (PVS1 + PS2 + PM2) | Pathogenic | DM |  |  | D |  | 22.9 | 0|0 |
hmut8 | 36 | Male | c.2157C > G | p.Y719* | Nonsense | De novo | Pathogenic (PVS1 + PS2 + PM2) | Pathogenic | DM |  |  | D |  | 22.9 | 0|0 |
hmut10 | 33 | Female | c.2188C > T | p.R730* | Nonsense | De novo | Pathogenic (PVS1 + PS2 + PM2 + PP5) | Pathogenic | DM |  |  | D |  | 36 | 0|0 |
hmut11 | 13 | Male | c.2188C > T | p.R730* | Nonsense | De novo | Pathogenic (PVS1 + PS2 + PM2 + PP5) | Pathogenic | DM |  |  | D |  | 36 | 0|0 |
hmut12 | 16 | Male | c.2188C > T | p.R730* | Nonsense | De novo | Pathogenic (PVS1 + PS2 + PM2) | Pathogenic | DM |  |  | D |  | 36 | 0|0 |
hmut13 | 42 | Male | c.2289delC | p.Y764Mfs*8 | Frameshift | Not available | Pathogenic (PVS1 + PS2 + PM2) |  |  |  |  |  |  |  | 0|0 |
hmut14 | 25 | Male | c.2355_2356 del AA | p.E785Dfs*2 | Frameshift | De novo | Likely Pathogenic (PVS1 + PM2) |  |  |  |  |  |  |  | 0|0 |
hmut15 | 56 | Female | c.2491_2494 del TTAA | p.L831I fs*82 | Frameshift | De novo | Pathogenic (PVS1 + PS2 + PM2) | Pathogenic | DM |  |  |  |  |  | 1|0 |