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Table 3 Top five SNPs from tier 3 analysis: genome-wide

From: The female protective effect in autism spectrum disorder is not mediated by a single genetic locus

  AGRE discovery (208 cases, 151 controls) SSC replication (207 cases, 676 controls)
SNP Allele 1/allele 2 Affected allele 1 frequency (%) Unaffected allele 1 frequency (%) Odds ratio P value Corrected P value Affected allele 1 frequency (%) Unaffected allele 1 frequency (%) Odds ratio P value
Predicted . 97.0 <24.3 >88 ≤1×10−8 ≤0.05 97.0 <24.3 >88 ≤1×10−8
rs2387667 G/A 33.7 13.2 2.54 1.1×10−5 1.0 15.9 19.5 0.82 0.25
rs867764 A/G 33.7 13.2 2.54 1.1×10−5 1.0 23.2 23.5 0.99 0.92
rs10518301 A/G 25.0 47.0 0.53 1.4×10−5 1.0 40.1 41.1 0.98 0.79
rs9302760 A/G 75.0 53.0 1.42 1.4×10−5 1.0 60.4 56.4 1.07 0.31
rs4745013 G/A 36.1 58.9 0.61 1.7×10−5 1.0 49.8 47.8 1.04 0.62