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Table 3 Final model performance on held-out test dataset

From: Identifying the neurodevelopmental and psychiatric signatures of genomic disorders associated with intellectual disability: a machine learning approach

Model

Brier score

AUC ROC

AUC ROC difference

Probability of direction

Random forest

0.188 [0.121, 0.243]

0.915 [0.838, 0.98]

–

–

Penalised LR

0.183 [0.121, 0.251]

0.904 [0.82, 0.981]

0.011 [− 0.099, 0.122]

0.843

ANN

0.186 [0.152, 0.225]

0.883 [0.787, 0.963]

0.031 [− 0.087, 0.151]

0.619

RBF SVM

0.21 [0.137, 0.284]

0.897 [0.814, 0.968]

0.018 [− 0.089, 0.124]

0.757

  1. Values shown are bootstrapped performance and the 95% confidence interval of the measure (AUROC and Brier Score), and difference in AUROC between the random forest and other ML models, with its 95% confidence interval, and the probability of direction for the AUROC difference