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Table 3 Top 20 ASD-associated differentially expressed genes by log2(fold change) in meta-analysis

From: A meta-analysis of two high-risk prospective cohort studies reveals autism-specific transcriptional changes to chromatin, autoimmune, and environmental response genes in umbilical cord blood

Probe ID

Gene symbol

MARBLES

EARLI

Meta-analysis

log2(FC)

p value

log2(FC)

p value

log2(FC)

SE

p value

q value

17004333

TUBB2A

0.36

9.6E−03

0.33

2.1E−01

0.35

0.12

4.8E−03

0.75

17094496

MIR1299

0.28

6.1E−03

0.15

2.3E−01

0.23

0.08

4.3E−03

0.75

17065047

LOC389831

0.26

6.1E−03

0.16

2.4E−01

0.23

0.08

4.2E−03

0.74

17063807

TRBV11-2

0.22

1.7E−02

0.19

1.7E−01

0.21

0.08

7.0E−03

0.79

16812322

RNU6-667P

0.13

1.4E−01

0.34

4.1E−03

0.20

0.07

3.7E−03

0.73

16662296

RNA5SP42

0.22

3.1E−03

0.12

4.4E−01

0.20

0.07

3.0E−03

0.73

17079513

RNU6-748P

0.15

1.3E−01

0.26

1.5E−02

0.20

0.07

6.4E−03

0.78

16837063

SNORA76C

0.20

2.5E−02

0.19

1.5E−01

0.20

0.08

9.2E−03

0.83

16755265

MIR331

0.15

2.1E−02

0.26

7.0E−04

0.20

0.05

6.4E−05

0.47

16698226

LINC01136

0.17

3.0E−02

0.30

4.9E−02

0.20

0.07

5.4E−03

0.76

16738477

RP11-872D17.8

0.22

2.6E−03

0.12

3.2E−01

0.19

0.06

2.3E−03

0.72

16797869

HERC2P7

− 0.17

4.7E−02

− 0.22

5.4E−02

− 0.19

0.07

7.0E−03

0.79

16778413

TPTE2P5

− 0.25

4.9E−04

− 0.01

9.2E−01

− 0.19

0.06

2.3E−03

0.72

16865104

MIR519A2

− 0.28

3.5E−05

− 0.07

3.3E−01

− 0.19

0.05

1.8E−04

0.70

17113511

RNU6-154P

− 0.22

1.9E−03

− 0.13

2.6E−01

− 0.20

0.06

1.4E−03

0.72

16810171

RP11-507B12.1

− 0.23

3.1E−03

− 0.16

1.8E−01

− 0.21

0.07

1.6E−03

0.72

17062251

RNA5SP241

− 0.15

5.8E−02

− 0.45

3.4E−03

− 0.21

0.07

2.6E−03

0.72

16788697

SNORD114-28

− 0.29

9.1E−03

− 0.17

2.8E−01

− 0.25

0.09

6.7E−03

0.78

16928422

CTA-390C10.10

− 0.17

9.8E−02

− 0.55

4.3E−04

− 0.29

0.09

7.2E−04

0.72

16733787

RP11-304M2.6

− 0.28

1.5E−02

− 0.40

5.3E−02

− 0.31

0.10

2.6E−03

0.72

  1. ASD autism spectrum disorder, FC fold change, SE standard error