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Table 2 CpG sites identified from meta-analysis as being suggestively associated (1 × 10−5) with ASD

From: Case-control meta-analysis of blood DNA methylation and autism spectrum disorder

Probe ID CHR Position SEED p SEED mean diffa SSC p SSC mean diffa METAL p FDR Nearest geneb Location
cg21151899 22 42,337,657 1.74E−06 0.78 2.75E−02 0.54 3.82E−07 0.16 CENPM Intronic
cg03731974 16 86,531,598 2.59E−04 0.09 8.03E−04 0.08 7.29E−07 0.16 FENDRR Intronic
cg09962502 2 96,971,189 1.89E−04 − 0.05 2.53E−03 − 0.08 1.58E−06 0.21 SNRNP200 Exonic
cg01798266 1 1.53E+08 2.06E−05 − 0.43 1.93E−02 − 0.13 1.90E−06 0.21 PGLYRP4 Exonic
cg01716316 17 40,897,182 1.28E−03 − 0.09 1.09E−03 − 0.13 4.94E−06 0.44 EZH1 111 bp
cg16234726 14 1.02E+08 3.41E−04 − 0.2 8.42E−03 − 0.37 9.13E−06 0.5 DIO3 69 Kb
cg09671955 1 1.69E+08 7.20E−03 − 0.47 2.25E−04 − 1.25 9.33E−06 0.5 CCDC181 65 bp
  1. aMean difference values computed as mean in cases − mean in controls
  2. bLocation within gene or distance to nearest gene