Molecular Autism

Table 2 Jonckheere trend test for correlation between copy number and gene expression

From: Significant transcriptional changes in 15q duplication but not Angelman syndrome deletion stem cell-derived neurons

Genes	DPSC		Neurons
Genes	p value	adj. p	p value	adj. p
TUBGCP5	0.057	0.105	0.140	0.224
NIPA1	0.021	0.066	0.139	0.224
CYFIP1	0.065	0.105	0.033	0.172
NIPA2	0.005	0.021	0.058	0.172
NDN	0.582	0.582	0.580	0.623
UBE3A	4.00E-04	0.006	0.002	0.014
ATP10A	0.194	0.239	0.495	0.609
GABRB3	0.336	0.384	0.139	0.224
GABRG3	0.060	0.105	0.195	0.284
HERC2	0.004	0.021	0.001	0.014
APBA2	0.094	0.126	0.059	0.172
NDNL2	0.062	0.105	0.065	0.172
TJP1	0.093	0.126	0.096	0.220
MTMR10	0.004	0.021	0.338	0.450
CHRNA7	0.481	0.513	0.584	0.623
GREM1	0.036	0.096	0.745	0.745

Back to article page

ISSN: 2040-2392

Contact us

General enquiries: journalsubmissions@springernature.com