Gene | Coordinate | ASD score | CHD8-binding in NPCs | CHD8 +/− NPC | CHD8 +/− neuron | ||||
---|---|---|---|---|---|---|---|---|---|
SFARI | AutismKB | Willsey | log2(FC) | q value | log2(FC) | q value | |||
ANK2 | chr4:113739265-114304896 | High confidence | 9 | hcASD | N | −1.87 | 1.36E-45 | −1.96 | 6.32E-08 |
SETD5 | chr3:9439299-9520924 | High confidence | 10 | Â | Y | 0.25 | 0.67 | 0.87 | 0.00053 |
SUV420H1 | chr11:67922330-67981295 | High confidence | 16 | hcASD | Y | −0.084 | 0.89 | −0.86 | 0.0020 |
SCN2A | chr2:166095912-166248818 | High confidence | 20 | hcASD | N | −0.64 | 0.86 | −3.31 | 5.67E-05 |
DEAF1 | chr11:644233-706715 | Strong candidate | 2 |  | N | −0.16 | 0.79 | −0.68 | 0.0010 |
MYT1L | chr2:1792885-2335032 | Strong candidate | 2 |  | N | 0.67 | 0.72 | −1.76 | 0.0077 |
BCL11A | chr2:60678302-60780702 | Strong candidate | 9 | Â | N | 1.91 | 0.029 | 0.25 | 0.61 |
CNTN4 | chr3:2140497-3099645 | Strong candidate | 9 | Â | N | 6.02 | 0.53 | 5.15 | 1.60E-14 |
CACNA2D3 | chr3:54156574-55108584 | Strong candidate | 10 | pASD | Y | 2.64 | 0.0036 | −2.95 | 0.00076 |
CACNA1H | chr16:1203241-1271771 | Strong candidate | 10 |  | Y | 0.75 | 0.045 | −0.19 | 0.58 |
NRXN1 | chr2:50145643-51259674 | Strong candidate | 28 | pASD | Y | −0.81 | 0.77 | −1.71 | 2.13E-05 |
MET | chr7:116312444-116438440 | Strong candidate | 33 |  | N | 0.69 | 0.82 | −3.56 | 3.45E-05 |
GABRB3 | chr15:26788693-27184686 | Strong candidate | 34 |  | N | −0.43 | 0.66 | −1.70 | 0.00030 |
RELN | chr7:103112231-103629963 | Strong candidate | 43 | pASD | N | 1.82 | 0.16 | −2.92 | 1.46E-06 |