|
SNP or SNP-SNP interaction
|
Phenotype
|
P values (uncorrected)a
|
Minor allele/major alleleb
|
MAF (HapMap CEPH)c
|
Frequency of minor allele
|
χ2
|
|---|
|
Cases
|
Controls
| |
|---|
|
rs7180158
|
AS
|
3.58E-04
|
A/G
|
A = 0.24
|
0.1624
|
0.08272
|
12.74
|
|
rs7165604
|
AS
|
4.51E-04
|
C/T
|
C = 0.17
|
0.1174
|
0.05145
|
12.31
|
|
rs12593579
|
AS
|
6.68E-04
|
C/A
|
C = 0.21
|
0.194
|
0.1093
|
11.58
|
|
rs11636966
|
EQ
|
5.94E-04
|
T/C
|
T = 0.22
|
NA
|
NA
|
NA
|
|
rs9806546
|
EQ
|
1.47E-03
|
A/G
|
A = 0.40
|
NA
|
NA
|
NA
|
|
rs12438141-rs1035751
|
EFT
|
7.59E-06
|
C/T - A/G
|
T = 0.13, G = 0.06
|
NA
|
NA
|
NA
|
|
rs12438141-rs7179514
|
EFT
|
5.21E-06
|
C/T - C/G
|
T = 0.13, G = 0.31
|
NA
|
NA
|
NA
|
|
rs7174437-rs1863455
|
MRT
|
1.58E-05
|
C/T - C/T
|
C = 0.12, C = 0.08
|
NA
|
NA
|
NA
|
- Abbreviations: AQ, Autism Spectrum Quotient; AS, Asperger syndrome; EFT, Embedded Figures Test; EQ, Empathy Quotient; MRT, Mental Rotation Test; NA, not applicable; SNP, single nucleotide polymorphism.
- aCorrected P-value threshold is 3.6 × 10-05.
- bAlleles for SNP-SNP pairs have been provided in the order they are written.
- cMAF for SNP-SNP pairs have been provided in the order they are written.
