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Table 2 Taqman case/control confirmation set data

From: Evidence of novel fine-scale structural variation at autism spectrum disorder candidate loci

Indel region (hg18 coordinates)

LOCUS

Estimated size (bp)

Case (gain)

Control (gain)

Case (loss)

Control(loss)

Previously described rare events

      

chr3:8,749,197-8,795,876

OXTRa

46679

1

0

1

1

Novel rare events

      

chr16:8,666,148-8,704,012

ABAT

37864

0

0

1

0

chr2:50,948,094-51,013,968

NRXN1-probeA

65874

0

0

1

1

 

NRXN1-probeB

 

0

0

1

0

chr3:50,207,690-50,243,268

SLC38A3

35578

0

0

5

8

chr4:6,158,503-6,162,618

JAKMIP1

4115

0

0

1

1

chrY:15,135,574-15,474,858

NLGN4Y

339284

0

0

1

0

  1. aOXTR loci was previously reported in [33] but was examined here within a novel group of individuals.