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Table 2 Results for the SNPs that survived chromosome-wide multiple testing in the meta- and joint analyses and for the two neighboring significant SNPs

From: An X chromosome-wide association study in autism families identifies TBL1X as a novel autism spectrum disorder candidate gene in males

Marker Map position (bp) Minor/major allele MAFa Discovery Validation Meta Joint Test Gene
rs5934665 9,570,450 G/A 0.433 2.87 × 10-3 1.87 × 10-3 1.77 × 10-5 3.00 × 10-5 Male TBL1X
rs5934665 9,570,450 G/A 0.449 2.46 × 10-1 3.24 × 10-1 8.59 × 10-1 4.67 × 10-1 Female TBL1X
rs17321050 9,573,099 G/T 0.335 5.89 × 10-3 2.56 × 10-4 4.86 × 10-6 4.53 × 10-6 Male TBL1X
rs17321050 9,573,099 G/T 0.359 1.99 × 10-1 5.22 × 10-1 6.15 × 10-1 3.85 × 10-1 Female TBL1X
rs2188766 9,574,739 C/T 0.432 4.33 × 10-3 4.42 × 10-4 7.76 × 10-6 2.00 × 10-5 Male TBL1X
rs2188766 9,574,739 C/T 0.451 2.34 × 10-1 3.80 × 10-1 7.86 × 10-1 4.21 × 10-1 Female TBL1X
  1. aMinor allele frequency (MAF) estimated on the basis of the discovery data set. TBL1X = transducin β-like 1X-linked gene.