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Table 3 Case-control genotype-based test results.

From: Polymorphisms in leucine-rich repeat genes are associated with autism spectrum disorder susceptibility in populations of European ancestry

SNP

Population

Model

OR

CI

P-value

rs10261004

Northern Dutch

Additive G

0.44

(0.26, 0.75)

3.00E-03

rs10261004

Northern Dutch

TT versus GG/GT

2.42

(1.33, 4.41)

4.00E-03

rs1998753

Northern Dutch

Additive G

0.10

(0.05, 0.20)

5.68E-12

rs1998753

Northern Dutch

AG versus GG/AA

9.64

(5.06, 18.38)

5.68E-12

rs17279006

Overall

Additive G

0.62

(0.45, 0.84)

2.22E-03

rs17279006

Overall

AA versus GG/AG

1.65

(1.19, 2.29)

2.59E-03

rs17279006

Multiplex (IMGSAC)

AA versus GG/AG

2.14

(1.28, 3.59)

3.96E-03

rs17279006

Multiplex (IMGSAC)

Additive G

0.49

(0.30, 0.79)

4.00E-03

rs1925613

Overall

CC versus AA/AC

1.81

(1.37, 2.39)

2.97E-05

rs1925613

Overall

Additive C

1.35

(1.16, 1.57)

7.82E-05

rs1925613

Singleton (IMGSAC)

CC versus AA/AC

3.01

(1.66, 5.47)

2.81E-04

rs1925613

Singleton (IMGSAC)

Additive C

1.80

(1.27, 2.54)

8.97E-04

rs10997482

Overall

Additive G

1.38

(1.20, 1.60)

9.81E-06

rs10997482

Overall

GG versus AA/AG

1.60

(1.27, 2.00)

4.63E-05

rs10997482

Singleton (IMGSAC)

Additive A

0.54

(0.38, 0.77)

6.85E-04

rs10997482

Singleton (IMGSAC)

GG versus AA/AG

2.41

(1.45, 4.03)

7.45E-04

rs2619652

Overall

Additive T

0.76

(0.67, 0.88)

1.57E-04

rs2619652

Overall

TT versus CC/CT

0.63

(0.49, 0.81)

2.71E-04

rs2619652

Singleton (IMGSAC)

Additive T

0.58

(0.41, 0.82)

1.95E-03

rs2619652

Singleton (IMGSAC)

TT versus CC/CT

0.34

(0.17, 0.69)

2.56E-03

rs10740268

Overall

TT versus CC/CT

0.51

(0.38, 0.70)

2.16E-05

rs10740268

Overall

Additive C

1.84

(1.38, 2.45)

3.48E-05

rs12785206

Overall

TT versus CC/CT

1.49

(1.20, 1.86)

3.96E-04

rs12785206

Singleton (IMGSAC)

CC/CT versus TT

0.37

(0.22, 0.65)

4.20E-04

rs12785206

Singleton (IMGSAC)

Additive C

0.48

(0.31, 0.74)

1.00E-03

  1. Only the most significant results are shown (P < 0.005). SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.